Package: VSOLassoBag 0.99.1

VSOLassoBag: Variable Selection Oriented LASSO Bagging Algorithm

A wrapped LASSO approach by integrating an ensemble learning strategy to help select efficient, stable, and high confidential variables from omics-based data. Using a bagging strategy in combination of a parametric method or inflection point search method for cut-off threshold determination. This package can integrate and vote variables generated from multiple LASSO models to determine the optimal candidates. Luo H, Zhao Q, et al (2020) <doi:10.1126/scitranslmed.aax7533> for more details.

Authors:Jiaqi Liang [aut], Chaoye Wang [aut, cre]

VSOLassoBag_0.99.1.tar.gz
VSOLassoBag_0.99.1.zip(r-4.5)VSOLassoBag_0.99.1.zip(r-4.4)VSOLassoBag_0.99.1.zip(r-4.3)
VSOLassoBag_0.99.1.tgz(r-4.4-any)VSOLassoBag_0.99.1.tgz(r-4.3-any)
VSOLassoBag_0.99.1.tar.gz(r-4.5-noble)VSOLassoBag_0.99.1.tar.gz(r-4.4-noble)
VSOLassoBag_0.99.1.tgz(r-4.4-emscripten)VSOLassoBag_0.99.1.tgz(r-4.3-emscripten)
VSOLassoBag.pdf |VSOLassoBag.html
VSOLassoBag/json (API)
NEWS

# Install 'VSOLassoBag' in R:
install.packages('VSOLassoBag', repos = c('https://chywang17.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Datasets:

On CRAN:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

softwarestatisticalmethodfeatureextraction

2.00 score 6 scripts 212 downloads 4 exports 64 dependencies

Last updated 2 years agofrom:c87efe23dd. Checks:OK: 5 NOTE: 2. Indexed: yes.

TargetResultDate
Doc / VignettesOKNov 21 2024
R-4.5-winNOTENov 21 2024
R-4.5-linuxNOTENov 21 2024
R-4.4-winOKNov 21 2024
R-4.4-macOKNov 21 2024
R-4.3-winOKNov 21 2024
R-4.3-macOKNov 21 2024

Exports:kneedleLessPermutationsimpleEstimationVSOLassoBag

Dependencies:abindaskpassBiobaseBiocGenericsclicodetoolscolorspacecrayoncurlDelayedArrayfansifarverforeachgenericsGenomeInfoDbGenomeInfoDbDataGenomicRangesggplot2glmnetgluegtablehttrIRangesisobanditeratorsjsonlitelabelinglatticelifecyclemagrittrMASSMatrixMatrixGenericsmatrixStatsmgcvmimemunsellnlmeopensslpbapplypillarpkgconfigPOTR6RColorBrewerRcppRcppEigenrlangS4ArraysS4VectorsscalesshapeSparseArraySummarizedExperimentsurvivalsystibbleUCSC.utilsutf8vctrsviridisLitewithrXVectorzlibbioc

VSOLassoBag

Rendered fromVSOLassoBag.Rmdusingknitr::rmarkdownon Nov 21 2024.

Last update: 2023-03-24
Started: 2022-11-25